If you love brownies, cookies, and peanut butter cups, this recipe is about to become your new favorite dessert! These Brookie Peanut Butter Cups combine a chewy gluten free cookie base, a creamy peanut butter center, and a rich fudgy brownie top. They bake together into the ultimate layered dessert that tastes like a bakery treat but is surprisingly simple to make at home!

Brookie peanut butter cups.

They are perfect for parties, bake sales, holidays, or just when you want something seriously indulgent!

What Are Brookie Peanut Butter Cups?

A brookie is a combination of a brownie and a cookie. In this recipe, we take it one step further by adding a creamy peanut butter layer in the center. The result is a three layer dessert baked in a muffin pan so each serving is perfectly portioned.

Ingredients

  • 1 cup gluten free cookie dough
  • ½ cup creamy all natural peanut butter
  • 1 cup gluten free brownie batter
Bite of Brookie muffin.

Ingredient Notes

Use your favorite gluten free dough. Make sure it is thick enough to press into the muffin pan without spreading too much.

Peanut butter

Use creamy all natural peanut butter made from only peanuts and salt. Avoid overly oily peanut butter and avoid varieties with added sugar syrups for best texture.

Gluten free brownie batter

The batter should be thick but pourable. If it is too thin, it may mix into the peanut butter layer.

How to Make Brookie Peanut Butter Cups

First, preheat your oven to 350 degrees Fahrenheit. Generously spray a muffin pan with nonstick spray.

Take approximately 1 tablespoon of cookie dough. Roll it into a ball and press it down into each muffin cavity, fully covering the bottom of the cavity.

Then, drop a teaspoon sized dollop of peanut butter on top.

Peanut butter in circle pan.

Finally, spoon about 1 tablespoon of brownie batter on top.

Batter poured into muffin pan.

Repeat for the rest of the pan.

Bake for 15 to 18 minutes.

Finally, remove from the oven. Allow these to cool for at least 2 hours in the pan. Then, use a knife around the edges of each peanut butter cup to help you remove them.

Chocolate muffin tops.

Why Cooling in the Pan Matters

These brookies continue to set as they cool. The peanut butter layer softens during baking and firms back up as it cools. If you try to remove them too early, they may fall apart. Letting them cool completely allows the cookie base to firm up and the brownie top to finish setting.

Texture Breakdown

LayerTexture After Cooling
Cookie BaseChewy and slightly crisp on the edges
Peanut Butter CenterSoft and creamy
Brownie TopFudgy and rich

Common Mistakes and How to Avoid Them

Peanut butter sinking

If your brownie batter is too thin, it can push the peanut butter downward. Use thick brownie batter.

Overbaking

Bake just until the tops look set. Overbaking can dry out the brownie layer.

Sticking to the pan

Generously spray the muffin pan and allow full cooling time before removing.

Frequently Asked Questions

Can I freeze brookie peanut butter cups?

Yes. Once fully cooled, store in an airtight container and freeze for up to 2 months. Thaw at room temperature before serving.

Can I use crunchy peanut butter?

Yes, but the center will be less smooth. For a classic peanut butter cup texture, creamy works best.

Can I make these dairy free?

Yes, as long as your cookie dough and brownie batter are dairy free.

Do I need cupcake liners?

You can use them, but spraying the pan directly creates slightly crispier edges.

Close up of Brookie peanut butter cups.

You May Also Like

If you make these gluten free Brookie peanut butter cups, I would really appreciate a review! You can find me on InstagramFacebook, and Pinterest. I would love for you to follow along!  For more ideas, check out these Dessert Recipes.

Brookie peanut butter cups.

Get the Recipe: Brookie Peanut Butter Cups

Every bite of these Brookie Peanut Butter Cups is a perfect balance! You’ll love the savory, salt-kissed peanut butter center as it melts into the sugary, chocolatey layers. It’s incredibly rich, dark, and decadent without being overpowering!
No ratings yet

Ingredients

  • 1 cup gluten free cookie dough, see note
  • ½ cup creamy all natural peanut butter
  • 1 cup gluten free brownie batter, see note

Instructions 

  • First, preheat your oven to 350 degrees Fahrenheit. Generously spray a muffin pan with nonstick spray.
  • Take approximately 1 tablespoon of cookie dough. Roll it into a ball and press it down into each muffin cavity, fully covering the bottom of the cavity.
  • Then, drop a teaspoon sized dollop of peanut butter on top.
  • Finally, spoon about 1 tablespoon of brownie batter on top.
  • Repeat for the rest of the pan.
  • Bake for 15 to 18 minutes.
  • Finally, remove from the oven. Allow these to cool for at least 2 hours in the pan. Then, use a knife around the edges of each peanut butter cup to help you remove them.

Notes

  • Feel free to use homemade cookie dough and brownie batter. Or, use store bought. Both work well!
  • I used this cookie dough and this brownie batter.
  • I recommend using all natural creamy peanut butter made from only peanuts and salt.
  • They must cool in their pan. Otherwise, it will be tough to remove them from their pan.
  • Store any leftovers in an airtight container for up to 4 days at room temperature.
Calories: 237kcal, Carbohydrates: 30g, Protein: 4g, Fat: 12g, Saturated Fat: 3g, Polyunsaturated Fat: 2g, Monounsaturated Fat: 6g, Cholesterol: 2mg, Sodium: 161mg, Potassium: 90mg, Fiber: 1g, Sugar: 18g, Vitamin A: 7IU, Calcium: 7mg, Iron: 1mg